Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVL-LHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFL-------PAAQGRTPLPFYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRA---GYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWD-----KPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT |
| 1BEE Chain:A ((2-304)) | VNAIRTPDQRFSNLDQYPFSPNYLDDLPG-YPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAY-KYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMV-AQRDQACIDIST---EAISFWQNDWNGQTFMAI-GMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111894 for 2431 contacts (-46.0/contact) +
2D Compatibility (PS) -30443 + (NN) -13762 + (LL) 1020
1D Compatibility (HY) -22400 + (ID) 5900
Total energy: -183379.0 ( -75.43 by residue)
QMean score : 0.461
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