Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHAKVGDYLVVKGTTT--ERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVTATEHAEAEKRAAARAGHAAT
4QQG Chain:A ((7-49))
--IIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYID-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4370 for 194 contacts (-22.5/contact) +
2D Compatibility (PS) -4118 + (NN) 1767 + (LL) 2784
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -6837.0 ( -35.24 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4QQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QQG-query.scw
PDB file :
Tito_Scwrl_4QQG.pdb
: