Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEP---DDWD-APVPGTGAGVFTGIAGSLSRG-FR--GAD-RL-YGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDAS----AWVGIGTPDFVEV-PIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLAC-TPFVAVSNSSETQSVFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAAD---NLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 3QTD Chain:A ((16-449)) | ---LREQVEQIIAEARR-QGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQR----KGSASTSATGEAAIRETVAAALAIARHTSEDECA-GLADAALMARELPELDLYHPWSLSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAISGGSLYRKSSFLE-GAL----GQRLFPEWLSIDERPHLVGALGSASFDS------------DGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGVHNLFVSHGDEDQAALIRRMERGLLVTELMGQ-GVNLVTGDYSRGA-AG-YWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRG--------NLHTGSVLVESMMVAGR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180526 for 3440 contacts (-52.5/contact) +
2D Compatibility (PS) -44206 + (NN) -17971 + (LL) 3048
1D Compatibility (HY) -5600 + (ID) 3250
Total energy: -248505.0 ( -72.24 by residue)
QMean score : 0.397
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