Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
2LPD Chain:A ((16-84))-TQGPGSMDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREHLNQ-


General information:
TITO was launched using:
RESULT:

Template: 2LPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29603 for 388 contacts (-76.3/contact) +
2D Compatibility (PS) -7770 + (NN) -7739 + (LL) 132
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -49780.0 ( -128.30 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_2LPD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LPD-query.scw
PDB file : Tito_Scwrl_2LPD.pdb: