Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALRRRHEPDGWPFSQRSEKPNAVRHAVRCSAVSAAASTANGTPVNWVSGRVTRAMGVHRQTRGGVASVHADSLRGAVLVHGQLRNSIPISANVPASGANTKSSIAH
2KL8 Chain:A ((1-85))
MEMDIRFRGD---------DLEAFEKALK--EMIRQARKFAGTVTYTLDGN-----DLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH------
General information:
TITO was launched using:
RESULT:
Template:
2KL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7648 for 567 contacts (-13.5/contact) +
2D Compatibility (PS) -8867 + (NN) -2378 + (LL) 1368
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -20925.0 ( -36.90 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_2KL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL8-query.scw
PDB file :
Tito_Scwrl_2KL8.pdb
: