Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALNRAVASARVGTEVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQATVWDKEPAEWGPDYYERIGVSFELPNH---YQKLTGYENLRFFASLYAGATADPMQLLAAVGLADDAHTLVGKY-------------SKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIVDLKARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELKIARSRRRVRVEYRGDGGGLETAEFGMDGLADDPAFHSVLRNHHVETIHSREASLDDVFVEVTGRQLT |
| 4WBS Chain:A ((42-274)) | -------------------VRNLKKRY--GSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSY-LPQEASVFRKLSVEENIRAVLELQVG---DDGKRLSKDAIASRTEALLDELQISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQRNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENESVRRV----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104701 for 1660 contacts (-63.1/contact) +
2D Compatibility (PS) -23131 + (NN) -6242 + (LL) 5508
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -147616.0 ( -88.93 by residue)
QMean score : 0.504
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