Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAA-IKAAQRAILASHDAAAVGGAAEFDADAGRE |
1DOW Chain:B ((118-149)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPTNVQRLAEPSQMLKHAVVNLINYQDDAELA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1535 for 101 contacts (-15.2/contact) +
2D Compatibility (PS) -2966 + (NN) 291 + (LL) 15928
1D Compatibility (HY) 800 + (ID) 350
Total energy: 12168.0 ( 120.48 by residue)
QMean score : -0.179
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