Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
| 3MIT Chain:B ((29-85)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKIFSGDVVDAVDVTFTYYGKTETRHFGGSGGTPHEIVLQEGEYLVGMKGEFGNYHG-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19330 for 265 contacts (-72.9/contact) +
2D Compatibility (PS) -5726 + (NN) 2441 + (LL) 18632
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -6433.0 ( -24.28 by residue)
QMean score : -0.195
|
|
|