Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
1EK8 Chain:A ((1-184))
MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQ-
General information:
TITO was launched using:
RESULT:
Template:
1EK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53110 for 1254 contacts (-42.4/contact) +
2D Compatibility (PS) -20276 + (NN) -11456 + (LL) 192
1D Compatibility (HY) -10800 + (ID) 3700
Total energy: -99150.0 ( -79.07 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1EK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EK8-query.scw
PDB file :
Tito_Scwrl_1EK8.pdb
: