Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQEMTEQWLEGCAVQRIMFRDGLVLNFDDYNELVISVPLQLTLPAIETSPAEVVAIDPNDPADHERPLFDFAGATCTAFVWYDTGDLHLEFSDGHQIDVHPDDRVTAWELY----GKYHG-YAACLAPGKLRVVRHDVADANGDQ
2AUW Chain:A ((9-71))
---------------------------------------------------------------------------PKLTAVEALAPYRLRTTWSTGEVLEVDVGDILRKIPDLAPILDPEAFARVHIAEWEGSVEWFD---------
General information:
TITO was launched using:
RESULT:
Template:
2AUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26859 for 311 contacts (-86.4/contact) +
2D Compatibility (PS) -6147 + (NN) -1376 + (LL) 5496
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -30436.0 ( -97.86 by residue)
QMean score : 0.118
(partial model without unconserved sides chains):
PDB file :
Tito_2AUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AUW-query.scw
PDB file :
Tito_Scwrl_2AUW.pdb
: