Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGPEHGSASTIEILPVIGLPEFRPGDDLSAAVAAAAPWLRDGDVVVVTSKVVSKCEGRLVPAPEDPEQRDRLRRKLIEDEAVRVLARKDRTLITENRLGLVQAAAGVDGSNVGRSELALLPVDPDASAATLRAGLRERLGVTVAVVITDTMGRAWRNGQTDAAVGAAGLAVLRNYAGVRDPYGNELVVTEVAVADEIAAAADLVKGKLTATPVAVVRGFGVSDDGSTARQLLRPGANDLFWLGTAEALELGRQQAQLLRRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLDRMKDKWRSDLTSDGLPADAIERRV-ARGQ-----ILYDAPEVVIPMLVPDGAHSYPDAARTDAEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAAD--LVR---DELDLPVDWEPLGAIAIGYADEPSGLRDPVPAADLLILK |
3EK3 Chain:A ((14-188)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRSVRAYDRKQIPADDLNAILEAGAYAPSGMHYETWHFTAVCNTVKLEELNERIK----------GAFAKSDDKHLRERGHSETYCCYYHAPTLVIVSNEPKQWWAGMDCA--------------CAIENMFLAATSLGIASCWINQLGTTCDDPEVRAYLTSLGVPENHKVYGCVALGYKAEGALLKEKTVKAGTITI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92877 for 1221 contacts (-76.1/contact) +
2D Compatibility (PS) -17984 + (NN) -11670 + (LL) 18980
1D Compatibility (HY) -4800 + (ID) 2300
Total energy: -110651.0 ( -90.62 by residue)
QMean score : 0.460
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