Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGTCPCESSERNEPVSRVSGTNEVSDGNETNNPAEVSDGNETNNPAEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVTEKPLHPHEPHIEILRGQPTDQELAALIAVLGSISGSTPPAQPEPTRWGLPVDQLRYPVFSWQRITLQEMTHMRR
2KVC Chain:A ((26-55))
-----------------------------------------------------------------------------------------------------------TDSFAVLALLCRRLSHDEVKAVANELMRLG----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8941 for 140 contacts (-63.9/contact) +
2D Compatibility (PS) -3475 + (NN) -3497 + (LL) 2944
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -15169.0 ( -108.35 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2KVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVC-query.scw
PDB file :
Tito_Scwrl_2KVC.pdb
: