Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFA------ELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQP---LIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 2EG4 Chain:A ((18-221)) | ----------------------------------------------YEAGHLPGA----RHLDLSAPKLRLREEAELKALEGGLTELFQTLGL--RSPVVLY-DEGLTSRLCRTAFFLGLGGLEVQLWTEGWEPYATEKEE-------------PKPERTEVVAKLRRDWLLTADEAARHPLLLDVRSPEEFQGK-VHPPCCP-----RGGRIPGSKNAPLELFLSPEGL------LERLG--LQPGQEVGVYCHSGARSAVAFFVLRSLGVRA--RNYLGSMHEW-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81506 for 1463 contacts (-55.7/contact) +
2D Compatibility (PS) -21126 + (NN) -12551 + (LL) 5864
1D Compatibility (HY) -6800 + (ID) 3750
Total energy: -119869.0 ( -81.93 by residue)
QMean score : 0.371
|
|
|