Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTV-AVMQTPEALYRVAFECAQDLAADSVVYAEVRFAPEL------------HISCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRHA-AMSREIAELAIRFRDKGVVGFDIAGAEAGHPPTR---HLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE |
| 1QXL Chain:A ((9-348)) | -------------PKVELHVHLDGAIKPETILYYGKRRGIA-LPADTPEELLNII-GMDKPLTLPDFLAKFDYYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVSLVNQGLQEGERDFG-----VKVRSILCCMRHQPSWSSEVVELCKKYREQTVVAIDLAGDETIEGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEAVDTLKTERLGHGYHTLEDT-----------TLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQVNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEDEKKELLDLLYK----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -218043 for 2802 contacts (-77.8/contact) +
2D Compatibility (PS) -34510 + (NN) -9278 + (LL) 2064
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -285967.0 ( -102.06 by residue)
QMean score : 0.392
|
|
|