Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1DZR Chain:A ((9-174))
-------IPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPF--SQLPELSAKDAAAP---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DZR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93309 for 1251 contacts (-74.6/contact) +
2D Compatibility (PS) -17802 + (NN) -8300 + (LL) 2624
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -134087.0 ( -107.18 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_1DZR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DZR-query.scw
PDB file :
Tito_Scwrl_1DZR.pdb
: