Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEE--RYFVVTHWESDEAFQAWANGPAIA-AHAGHRANPVATGASLLEFEVVLDVGGTGKTA
4FNH Chain:A ((8-89))
------NRLQLQKGSAEETIERFYNR-QGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNYLNSDVFKEAHKNVRLKSDDDG-------------------
General information:
TITO was launched using:
RESULT:
Template:
4FNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18694 for 424 contacts (-44.1/contact) +
2D Compatibility (PS) -8962 + (NN) -4587 + (LL) 2144
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -35099.0 ( -82.78 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_4FNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNH-query.scw
PDB file :
Tito_Scwrl_4FNH.pdb
: