Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MVARHRAQAAADLASLAAAARLPSGLAAACARATLVARAMRVEHAQCRVVDLDVVVTVEVAVAFAGVATATARAGPAKVPTTPG
2C9L Chain:Y ((1-63))
MLEIKRYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLLLKQMCPSLDVDSII-----------------------PRTPD
General information:
TITO was launched using:
RESULT:
Template:
2C9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3548 for 252 contacts (-14.1/contact) +
2D Compatibility (PS) -7193 + (NN) -8548 + (LL) 2184
1D Compatibility (HY) 800 + (ID) 650
Total energy: -16955.0 ( -67.28 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_2C9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C9L-query.scw
PDB file :
Tito_Scwrl_2C9L.pdb
: