Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPG-----TIQVVIGPAMHAEGEGPRAIAEL---NQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
| 3H3O Chain:C ((38-84)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3228 for 131 contacts (-24.6/contact) +
2D Compatibility (PS) -3940 + (NN) -1617 + (LL) 15484
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 2999.0 ( 22.89 by residue)
QMean score : 0.155
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