Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS
1BML Chain:C ((185-224))
-----------------LKTLAIGDTITSQELLAQAQSILNKTHPGYTIYERDSSIVTHDNDIFRTILPMDQEFTYHVKNREQAEINNTD
General information:
TITO was launched using:
RESULT:
Template:
1BML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3949 for 163 contacts (-24.2/contact) +
2D Compatibility (PS) -3843 + (NN) 3263 + (LL) 1100
1D Compatibility (HY) 400 + (ID) 350
Total energy: -3379.0 ( -20.73 by residue)
QMean score : -0.003
(partial model without unconserved sides chains):
PDB file :
Tito_1BML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BML-query.scw
PDB file :
Tito_Scwrl_1BML.pdb
: