Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSE-AQAGEILGQAAFDVDDFKDTRLGGWWVGYE--HAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL |
2B34 Chain:A ((109-195)) | --------IEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHT-DR--HFAFK-QME-QAGAILTTSEATILGL---VGGSDHPKFK-EVQKLILTSAPDTGLVPLSKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23825 for 526 contacts (-45.3/contact) +
2D Compatibility (PS) -8675 + (NN) 850 + (LL) 14048
1D Compatibility (HY) 400 + (ID) 500
Total energy: -17702.0 ( -33.65 by residue)
QMean score : 0.112
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