Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFDLTAALGDRANQPEISRLLV---AQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS
1SR2 Chain:A ((796-887))
-----------PLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVK---------------------
General information:
TITO was launched using:
RESULT:
Template:
1SR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22120 for 620 contacts (-35.7/contact) +
2D Compatibility (PS) -9840 + (NN) -7175 + (LL) 2500
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -40585.0 ( -65.46 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1SR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SR2-query.scw
PDB file :
Tito_Scwrl_1SR2.pdb
: