Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
1XNF Chain:A ((61-117))
----------------------------------------------LARNDFSQALAI-----RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR
General information:
TITO was launched using:
RESULT:
Template:
1XNF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4807 for 379 contacts (-12.7/contact) +
2D Compatibility (PS) -6181 + (NN) -3315 + (LL) 3616
1D Compatibility (HY) -800 + (ID) 450
Total energy: -11937.0 ( -31.50 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1XNF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XNF-query.scw
PDB file :
Tito_Scwrl_1XNF.pdb
: