Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFAN-YAELSLATK-MAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHAAAS-GINGVAWDAVELPSQFMENW-CWEPEGLALISA----HYETGVALP-QDLLEKMLAAKNFQSGMMMVRQ-------LEFSLFDFELHATHGDGRSVLQVLEGIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGV-FN--------PDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA |
| 1KA2 Chain:A ((13-495)) | ------------------------------------------------------ILAKYRRIWAIGHAQSVLGWDLEVNMPKEGILERSVAQGELSVLSHELLLHPEFVNLVEKAKGL---ENLNEYERGIVRVLDRSIRIAR-----------------------------------------------AFPPEFIR---------------------------EVSETTSLATKAWEEAKAKDDF-------SKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKILEEG-------KVPR----EHPL----------------EKEKYEREWMERVNLWIL-QKFGFPLGTR------------------------------ARLDVSAHPFTTEFGI-----------RDVRITTRYEGYD-------FRRTILSTVHEFGHALYELQQDERFMFTPIAG-GVSLGIHESQSRFWENIIGRSKEFVELIYPVLKENLPFMSNYTPEDVYLYFNIVRPDF-IRTEADVVTYNFHILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKYSEGILQDIHWAH-GSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIGEDMDAEYFVRWVKEKYL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147867 for 3573 contacts (-41.4/contact) +
2D Compatibility (PS) -48840 + (NN) -20765 + (LL) 16264
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -213608.0 ( -59.78 by residue)
QMean score : 0.378
|
|
|