Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKP-GYRCAPINLGAN-TDPYQP-LERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAG--ARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 1R30 Chain:A ((72-245)) | --------------------------------------------------------------------KTGACPEDCKYCPQSSRYKT-----GLE-----AERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMP----YLEQMVQGVKAMGLEACM-TLGTL-SE--SQAQRLANAGLDYYNHNLDT-SPEFYGNIITTR-TYQERLDTLEKVRDAGIKVCSGGIVGL-GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105759 for 1285 contacts (-82.3/contact) +
2D Compatibility (PS) -18277 + (NN) -10342 + (LL) 4672
1D Compatibility (HY) -800 + (ID) 1350
Total energy: -131856.0 ( -102.61 by residue)
QMean score : 0.441
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