Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGV-ARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALA---GRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEE------YPVYNHDDLAASFAPV----MLALRQAL---ATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLV------VRADVPGESLRGHF---PQQAKVGSVEHIRDLVNLQLPG---IGLLPMPVAPRQIPYHAGSTY-FELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG |
| 4Q6O Chain:A ((21-437)) | M-----------IEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPV---------------------LNKPSMLRNH------------------RGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKG----AKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103257 for 3131 contacts (-33.0/contact) +
2D Compatibility (PS) -39311 + (NN) -4571 + (LL) 2248
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -161291.0 ( -51.51 by residue)
QMean score : 0.122
|
|
|