Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRS--------------------------VLLDRSLDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRT---GRGLKVDLP
3CT8 Chain:A ((14-146))
NLYFQGMLHHVEINVDHLEESIAFWDWLLGE-LGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP
General information:
TITO was launched using:
RESULT:
Template:
3CT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18518 for 592 contacts (-31.3/contact) +
2D Compatibility (PS) -10055 + (NN) -4484 + (LL) 92
1D Compatibility (HY) 1200 + (ID) 700
Total energy: -32465.0 ( -54.84 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_3CT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT8-query.scw
PDB file :
Tito_Scwrl_3CT8.pdb
: