Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
M-------LKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF
2KVT Chain:A ((1-71))
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDP----DKELEHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
2KVT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44143 for 328 contacts (-134.6/contact) +
2D Compatibility (PS) -6925 + (NN) -712 + (LL) 340
1D Compatibility (HY) 3600 + (ID) 500
Total energy: -48340.0 ( -147.38 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2KVT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVT-query.scw
PDB file :
Tito_Scwrl_2KVT.pdb
: