Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGATRKPGFTVAVLATLLAAVVVLLGAYTRLTHAGLGCPDWPGCYGFVHVPLSEAQLAHAELHFPDAPVEAQKGWNEMIHRYFAGALGLLILGLALHALVRRGRDGQPLKLPLLLLAVVIAQAAFGMWTVTLKLWPQVVTAHLLGGFTTLALLFLLALRLSGRFAARRYPAATRGLAGLALLLVIGQIALGGWVSSNYAAVACIDLPTCHGEWWPRMDFANGFHLTQHIGPNYLGGQLD----SDARTAIHMTHRIGALCVTLVLLLLAWRLQRSGLV---WPTALMLLGLSLQIGLGISNVLLHLP-LPVAVAHNGGGALLLLSLVLVNYRLRA-PASVRAPAPSPQRVRRTLPPAQGSRLKAA |
| 2XQH Chain:A ((23-280)) | -SDAKASGEFSVAVGN----------GARAT-EKASTAVGSWAAADGKQSTALGVGTYAYANA---------------------STALGSV--------------------------AFVDNTATYG-------------TAAGNR--------------------AKVDKDATEGTALGAKATV---------TNKNSVALGANSVTTRDNEVYI--GYKTGTESDKTYGTRVLGGLSDGTRNSDAATVGQLNRKVGGVYDDVKARITVESEKQKKYTDQKTSEVNEKVEARTTVGVDSDGKLTRAEGATKTIAVNDGLVALSGRTDRIDYAVGAIDGRVTRNTQSIEKNSKAIAANTRT----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116973 for 1713 contacts (-68.3/contact) +
2D Compatibility (PS) -25133 + (NN) -701 + (LL) 10492
1D Compatibility (HY) 6400 + (ID) 2750
Total energy: -128665.0 ( -75.11 by residue)
QMean score : 0.013
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