Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSLEPRGRQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLYGLGELLVKAMPILLCALGLALAYQARVWNIGAEGQLLVGALAGSAVAIQLLDWQSRWALAWVLLAGTAAGALWAGFAAWLRTRFNANEILTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVHLGALFGLLALAAVWVLAQRS-FLGFQVRVLG-------LDRRAAGFVGFREKRLVWFVLLFSGALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGILCASLLMALLY---LGGEAAQMSLNLPLALSGLF----QGMMLFFLLA--CDVLILYRPRLHGRWRKRPALRDALA |
| 4O6D Chain:A ((19-377)) | --LYFQSNADTGCAIDISRQ------ELRCGSGVFIHNDVEAWMDRYKYYPET---PQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEAVKDELNTLLKENGVDLSVVVEKQEGMYKSAPKRLTATANNTFVVDGPE-TKECPTQNRAWNSLEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDL--------------SYWIESRLNDTWKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTL--------------AGPRSNHNRR--PGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250073 for 2401 contacts (-104.2/contact) +
2D Compatibility (PS) -32835 + (NN) 6668 + (LL) 4124
1D Compatibility (HY) 3600 + (ID) 2450
Total energy: -270966.0 ( -112.86 by residue)
QMean score : 0.107
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