Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSSQE--------QG--------QW-------YFQRYIQHLP--------TAGEMVFFDRSWYNRA-GVERV---MGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTDT-------ADAPWTVIKSDDKKRAR-LNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
2OCP Chain:A ((1-238)) | ----------------------------------------------------------GPRRLSIEGNIAVGKSTFVKLLTKTYP--EW--HVATEPVATWQNIQLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEK-------G-IELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVND-DFSEEVTKQEDLMREVNTFVKNL----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23102 for 1308 contacts (-17.7/contact) +
2D Compatibility (PS) -19862 + (NN) -8575 + (LL) 7308
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -52881.0 ( -40.43 by residue)
QMean score : 0.353
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