Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFN---NLQEFLDLY-YAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQ------------THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRH----------LSEEQAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQ---RVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
| 1UIO Chain:A ((7-332)) | --------PKVELHVHLDGAIKPETILYFGKKRGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPSWSLEVLELCKKYNQKTV----------VAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGAGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150729 for 2611 contacts (-57.7/contact) +
2D Compatibility (PS) -31998 + (NN) -15226 + (LL) 1632
1D Compatibility (HY) -21200 + (ID) 4450
Total energy: -221971.0 ( -85.01 by residue)
QMean score : 0.442
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