Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
1O6B Chain:A ((8-160))
------PGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVELALQQKFRQ
General information:
TITO was launched using:
RESULT:
Template:
1O6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92444 for 1133 contacts (-81.6/contact) +
2D Compatibility (PS) -17261 + (NN) -12502 + (LL) 688
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -142119.0 ( -125.44 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1O6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O6B-query.scw
PDB file :
Tito_Scwrl_1O6B.pdb
: