Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTDAKRPLQLNDQGQLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVS--TSSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPRTL-LP---IGLEEQYGV--RVFTNADEGLKDVDVVIMLRLQRERMQGGLLPSEGEFFKL-YGLTEKRLKLAKPDAIVMHPGPINRGVEIESAVADGAQSVILNQVTYGIAIRMAVLSMAMSGQNTQRQLEQEDAE |
2HSE Chain:A ((7-305)) | -----------------KHIISINDLSRDDLNLVLATAAKL-----KANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYV-DAIVMRHPQEGAAR-LATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKER----LAPSEYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175533 for 2483 contacts (-70.7/contact) +
2D Compatibility (PS) -32065 + (NN) -16004 + (LL) 2140
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -247712.0 ( -99.76 by residue)
QMean score : 0.532
|
|
|