Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTLAPESTRQNLRSQRLNLLTNEP-HQRLESLV---KSKEPFASRDNFARFVAAQYLFQHDLEPLYRNE--ALA----R---L--FPGLASRARDDAARADLADLGHPVPEGDQ----S----------VREADLSLAEALGWLFVSEGSKLG-AAFLFKKA-AALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA |
| 3DDE Chain:A ((4-218)) | -----------IIDLTKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGHELMALSDIASIGFDREDVLSSKPLPATETLIAYLYWISATGNPVQRLGYSYWAENVYGYIDP-VLKAIQSTLDLT-PQSMKFFIAHSKIDAKHAEEVNEMLHEVCKTQEDVDSVVAVMENSLVLTARILDDVWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12827 for 1317 contacts (-9.7/contact) +
2D Compatibility (PS) -20067 + (NN) -7415 + (LL) 948
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -42761.0 ( -32.47 by residue)
QMean score : 0.235
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