Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDG-QGRRSWATISR-AP-----SGASCSRNRS-------ATRTYGWGATATTPATITGIPSTTAPAT
2BII Chain:A ((48-113))
-----------------SIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGK
General information:
TITO was launched using:
RESULT:
Template:
2BII.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4060 for 198 contacts (20.5/contact) +
2D Compatibility (PS) -5508 + (NN) -1627 + (LL) 476
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -6749.0 ( -34.09 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_2BII.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BII-query.scw
PDB file :
Tito_Scwrl_2BII.pdb
: