Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDL-NIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
5EUG Chain:A ((5-220))
-----------LTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPQPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMPVLP
General information:
TITO was launched using:
RESULT:
Template:
5EUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96738 for 1775 contacts (-54.5/contact) +
2D Compatibility (PS) -23331 + (NN) -12812 + (LL) 600
1D Compatibility (HY) -20000 + (ID) 6000
Total energy: -158281.0 ( -89.17 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_5EUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5EUG-query.scw
PDB file :
Tito_Scwrl_5EUG.pdb
: