Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQAGG-----QLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTLRGDNGTYT-CDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF--FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLKTRDGGSEEIA-VDGMFVAIGHTPNTSLFEGQLAL-KDGYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
| 4UP3 Chain:A ((7-313)) | ---------VVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSASAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERV---LNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPK------TSVDGVFACGDVQDRVYRQAIVAAGSGCMAALSCEKWLQTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216694 for 2539 contacts (-85.3/contact) +
2D Compatibility (PS) -32680 + (NN) -13873 + (LL) 1164
1D Compatibility (HY) -27200 + (ID) 6550
Total energy: -295833.0 ( -116.52 by residue)
QMean score : 0.572
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