Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFEHLVQVNDRTLVDLPVLDRLQLWEGLV-CRAREPQYFVV-GLERFEILVD-DGDRLHRRLYL-PG---LVVEDEVV-LKAPD-SAHYSIKPSAE----VAGGSLDMTIEEPEPGSLFVRFAYCTRYLQPLGDELPYDAFVKQAYIAMDVETIATIRDRFGASAASGS
1TW0 Chain:A ((3-123))
FVFRDETSSSVAP---------AKLYKALTKDSDTIAQKI-DGPIQSIELVEGNGGVGTIKKITANEGDKTSFVLQKVDAIDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKGDAPLSDAVRDDALAKGAGFFKAIEGYVLANPAEY-----
General information:
TITO was launched using:
RESULT:
Template:
1TW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33656 for 663 contacts (-50.8/contact) +
2D Compatibility (PS) -11338 + (NN) -1528 + (LL) 804
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -47618.0 ( -71.82 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_1TW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TW0-query.scw
PDB file :
Tito_Scwrl_1TW0.pdb
: