Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQKRILVTGAGSGFGREVALRLAA---RGHRTIAGVRGAGQAADLREEAGRRGVP---LRVETLDI----TVAADRERAWEWDIDVLLNNAGSAEAGASAEIPLELVRALFETNVFANLELTQGFVRRMVEQKRG-GKVLFVSSIAGLITGPYTGPYCASKHALEAFAEALHAELKPFGIQVGTINPGPYQTGFNDRMM------------ETWKRWYDPQRHFTDHSGVRFPFEQYDPEEMIARMVELAEADEGPFRTLLPQAFVEVVKDEQAQAWQRRL |
| 3KM0 Chain:A ((5-264)) | -----VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM--KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA------GSPEEVLDRTDIHTFHRFY----QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103046 for 1861 contacts (-55.4/contact) +
2D Compatibility (PS) -25003 + (NN) -12270 + (LL) 1348
1D Compatibility (HY) -20000 + (ID) 3900
Total energy: -162871.0 ( -87.52 by residue)
QMean score : 0.469
|
|
|