Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSQINRQYQLAQRP--SGLPGRDTFSFVETPLGEPA-EGQILVKNEYLSLDPAMRGWMND--ARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALG-VQDYFIGEPKGFYKVDPS--RAPLPRYLSALGMTGMTAYFALLDVGQPKNG--ETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRAR---MEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV |
| 2VNA Chain:A ((9-346)) | ----------LNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197893 for 2761 contacts (-71.7/contact) +
2D Compatibility (PS) -34967 + (NN) -14539 + (LL) 908
1D Compatibility (HY) -30400 + (ID) 6500
Total energy: -283391.0 ( -102.64 by residue)
QMean score : 0.446
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