Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLAELF-------AVMAPVLFGAGVGYVWVRLGHA----------------YPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMAL-------------ASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGM----TLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLM---GLDLQLPRWMANTVDLMAGLTIPLML---ITLGVSLASIR------------------PRQLGNGFFYGGLRLLLGALVGWSVALALQLPPLAQGVLVVQSSMPVAVFNYLYALRGNRSPDQVASLVLCSTLLSFAFIPLLLTWWLPALR---------------------------------------------------------------------------- |
| 1ONE Chain:A ((1-436)) | AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKT-SPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQT-AEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKA-ADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHGDKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ONE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -355678 for 2352 contacts (-151.2/contact) +
2D Compatibility (PS) -29812 + (NN) 4855 + (LL) 524
1D Compatibility (HY) 5200 + (ID) 2400
Total energy: -377311.0 ( -160.42 by residue)
QMean score : 0.201
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