Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWTKPSFTDLRLGFEVTLYFANR
1N3J Chain:A ((92-103))
------IKPIAIGEEITISYGDD
General information:
TITO was launched using:
RESULT:
Template:
1N3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1799 for 29 contacts (-62.0/contact) +
2D Compatibility (PS) -1168 + (NN) 704 + (LL) 312
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -3701.0 ( -127.62 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1N3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N3J-query.scw
PDB file :
Tito_Scwrl_1N3J.pdb
: