Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNK-VNTFAERLQGCFQFSMNGKV---PAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERG-AKVYAAQCAICHGADGQGQMALGQTVFPPLWG------AQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 1H1O Chain:A ((12-182)) | ---------------------------------------------------------------VSS--DCMVCHGMTGRDT-------LYPIVPRLAGQHKSYMEAQLKAYKDHSRADQNGEIYMWPVAQALDSAKITALADYFNAQKP---PMQSSGIKHAGAKEGKAIFNQGVTNEQIPACMECHGSDGQ-----GAGPFPRLAGQRYGYIIQQLTYFHNGTRVNTLMNQIAKNITVAQ--------MKDVAAYLSS------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19399 for 1163 contacts (-16.7/contact) +
2D Compatibility (PS) -16856 + (NN) -6198 + (LL) 6740
1D Compatibility (HY) -4400 + (ID) 2200
Total energy: -42313.0 ( -36.38 by residue)
QMean score : 0.127
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