Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFYEPDVQRMAAPLGELFAAVG--------------VRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGIDAA----FDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGASMG-ADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 4H4U Chain:A ((6-276)) | LKAPVVVLGAGLASV-SFVAELRQAGYQGL----ITVVGDEAE---RP-YDRP-------PLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGR----TLPYGTLVLATGAA---PRALPTLQGATMPVHTLRTLEDARRIQAGLRP---------QSRLLIVGGGVIGLELAAT---------ARTAGVHVSLVERQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTT-CPDVYALGDVTR----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151712 for 1996 contacts (-76.0/contact) +
2D Compatibility (PS) -26674 + (NN) -2972 + (LL) 10748
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -193360.0 ( -96.87 by residue)
QMean score : 0.489
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