Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQHPAEHSPLGKTSEYVSSYTPSLLFPISRTAKWAELGLSAETLPYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQSAFDSREALRAVLQKDLSAAVGAPVGVRLRSLDEVAEEGIGRLPGRCIDELDIAVDGYEQPRPELLRCDAGRIVEEQLYSHLLKSNCP-------VTGQPDWGTLVVDY--RGPALDPASLLAYLVSFRQHQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPDNRRLVRQ |
4FGC Chain:E ((43-139)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YFVKFNCPEFTSLAPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52033 for 545 contacts (-95.5/contact) +
2D Compatibility (PS) -9311 + (NN) -2993 + (LL) 11700
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -64837.0 ( -118.97 by residue)
QMean score : 0.474
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