Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
| 2L9U Chain:A ((637-676)) | ---------------------------------------------------------------------------------------MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRHHHHHH-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8489 for 154 contacts (-55.1/contact) +
2D Compatibility (PS) -4834 + (NN) -7342 + (LL) 15496
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -8669.0 ( -56.29 by residue)
QMean score : -0.064
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