Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPG-DEAPLDALAETVLALLAQYGSLRIAGLYRVRYDRTPEPQPLA-TLGEM------------PALDADDLLVRTCLERGELVSVRQELLER---G----EQRAHSALQVCVPLVDTDGRILALLAVEQMP-FFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 2ZMF Chain:A ((13-182)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------DFLLDVSKTYFDNIVAID-SLLEHIMIYAKNLVNADRCALFQVDHKN-KELYSDLFDIGEEKEGKPVFKKTKEIRFSIEKGIAGQVARTGEVLNIPDAYADPRFNREVDLYTGYTTRNILCMPIVS-RGSVIGVVQMVNKISGSAFSKTDENNFKMFAVFCALALHCANMYHR-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113469 for 1058 contacts (-107.2/contact) +
2D Compatibility (PS) -15846 + (NN) -5928 + (LL) 24944
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -116449.0 ( -110.07 by residue)
QMean score : 0.457
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