Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEFIDLKNQQARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSKPLGCYGDGGAIFTNDDELATAIRQIARHG----QDRRYHHIRV---GVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVN-----NISVYAQYTVRMD------NRESVQASLKAAGVPTAVHYPIPLNKQ------PAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN |
| 1MDZ Chain:A ((24-379)) | -------------------AAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHIGARGTAIFSFHAIKNITC-AEGGIVVTDNPQFADKLRSLKFHGLGVD------QAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADL----PFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTL-----TLPDTEWNSERICSLPLFPDMTESDFDRVITAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222520 for 2795 contacts (-79.6/contact) +
2D Compatibility (PS) -35684 + (NN) -21058 + (LL) 2604
1D Compatibility (HY) -24800 + (ID) 6150
Total energy: -307608.0 ( -110.06 by residue)
QMean score : 0.599
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