Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPC-DGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRY----AEQGPEGLLQGKRAFVLTARGGIYA-----GGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
2V9C Chain:A ((5-208))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDVAQYRP--LLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEG------SFEDSCDEAEQRL------------------
General information:
TITO was launched using:
RESULT:
Template:
2V9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109532 for 1451 contacts (-75.5/contact) +
2D Compatibility (PS) -20146 + (NN) -4319 + (LL) 1560
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -150637.0 ( -103.82 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_2V9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V9C-query.scw
PDB file :
Tito_Scwrl_2V9C.pdb
: