Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAER----DR-------------EDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYAN----EAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 2Y0L Chain:A ((254-399)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYLEGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVG--------------L-----GIPGLTFMTRYVKGDNVELAG-------Q-GEGREWERNTELQYVFQSGALKNLGIRWRNATFRSNF------TRDIDENRLIVSYTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22404 for 752 contacts (29.8/contact) +
2D Compatibility (PS) -12421 + (NN) 4741 + (LL) 13228
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 25252.0 ( 33.58 by residue)
QMean score : 0.143
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